Name
hNPC_TE_9508
Genome
Human-hg19
Genomic loci
chr12: 12367753 - 12409504
Size/Length
41751 bp
Tissue/Cell type
hNPC
Enhancer type
Typical enhancer
protein coding
lncRNA
pseudogene
rRNA
miRNA
snRNA/snoRNA
IG gene
other
| Gene symbol | Type | Position | Strand | Promoter | Promoter region | Cell line/Tissue |
| MIR624 | miRNA | chr14: 31483852 - 31483948 | - | hNPC_MPT_5902 | chr14: 31478948 - 31500849 | hNPC |
| AP4S1 | protein_coding | chr14: 31494312 - 31562818 | + | hNPC_MPT_5902 | chr14: 31478948 - 31500849 | hNPC |
| RP11-829H16.5 | pseudogene | chr14: 31487652 - 31488002 | + | hNPC_MPT_5902 | chr14: 31478948 - 31500849 | hNPC |
| STRN3 | protein_coding | chr14: 31363005 - 31495607 | - | hNPC_MPT_5902 | chr14: 31478948 - 31500849 | hNPC |
| GPR19 | protein_coding | chr12: 12813825 - 12849141 | - | hNPC_MPT_4397 | chr12: 12844121 - 12854141 | hNPC |
| TTYH2 | protein_coding | chr17: 72209653 - 72258155 | + | hNPC_MPT_9159 | chr17: 72239097 - 72249097 | hNPC |
| LMO3 | protein_coding | chr12: 16701307 - 16763528 | - | hNPC_MPT_4426 | chr12: 16750130 - 16768528 | hNPC |
| PLEKHO1 | protein_coding | chr1: 150121373 - 150136916 | + | hNPC_MPT_1266 | chr1: 150116373 - 150134123 | hNPC |
| RP11-267J23.4 | pseudogene | chr12: 12264097 - 12264423 | + | hNPC_MPT_4390 | chr12: 12259097 - 12269097 | hNPC |
| CRTC2 | protein_coding | chr1: 153920145 - 153931101 | - | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| JTB | protein_coding | chr1: 153946745 - 153950164 | - | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| RP11-422P24.11 | lncRNA | chr1: 153950219 - 153951636 | + | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| SLC39A1 | protein_coding | chr1: 153931575 - 153940188 | - | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| RPS27 | protein_coding | chr1: 153963235 - 153964626 | + | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| CREB3L4 | protein_coding | chr1: 153940010 - 153946839 | + | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| RAB13 | protein_coding | chr1: 153954127 - 153958834 | - | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| RP11-422P24.10 | lncRNA | chr1: 153938992 - 153939406 | + | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| RP11-422P24.9 | pseudogene | chr1: 153968108 - 153968436 | + | hNPC_MPT_1357 | chr1: 153926052 - 153973108 | hNPC |
| KB-1836B5.4 | lncRNA | chr8: 37956989 - 37957449 | + | hNPC_MPT_19930 | chr8: 37951989 - 37968457 | hNPC |
| ASH2L | protein_coding | chr8: 37962760 - 38001594 | + | hNPC_MPT_19930 | chr8: 37951989 - 37968457 | hNPC |
| MIR4257 | miRNA | chr1: 150524405 - 150524490 | + | hNPC_MPT_1275 | chr1: 150516884 - 150544336 | hNPC |
| ADAMTSL4 | protein_coding | chr1: 150521884 - 150533413 | + | hNPC_MPT_1275 | chr1: 150516884 - 150544336 | hNPC |
| RP11-54A4.2 | lncRNA | chr1: 150521040 - 150530200 | - | hNPC_MPT_1275 | chr1: 150516884 - 150544336 | hNPC |
| ADAMTSL4-AS1 | protein_coding | chr1: 150533480 - 150533969 | - | hNPC_MPT_1275 | chr1: 150516884 - 150544336 | hNPC |
| RN7SL473P | misc_RNA | chr1: 150539040 - 150539336 | - | hNPC_MPT_1275 | chr1: 150516884 - 150544336 | hNPC |
| AL356356.1 | protein_coding | chr1: 150521897 - 150524367 | + | hNPC_MPT_1275 | chr1: 150516884 - 150544336 | hNPC |
| NFXL1 | protein_coding | chr4: 47849257 - 47916653 | - | hNPC_MPT_15772 | chr4: 47911556 - 47921633 | hNPC |
| PCNT | protein_coding | chr21: 47744036 - 47865682 | + | hNPC_MPT_13676 | chr21: 47733120 - 47749036 | hNPC |
| C21orf58 | protein_coding | chr21: 47720095 - 47743789 | - | hNPC_MPT_13676 | chr21: 47733120 - 47749036 | hNPC |
| AC005152.2 | lncRNA | chr17: 70033455 - 70217977 | - | hNPC_MPT_9139 | chr17: 70107157 - 70122161 | hNPC |
| SOX9 | protein_coding | chr17: 70117161 - 70122561 | + | hNPC_MPT_9139 | chr17: 70107157 - 70122161 | hNPC |
| RP11-501C14.5 | lncRNA | chr17: 47072628 - 47074854 | - | hNPC_MPT_8920 | chr17: 47069774 - 47080108 | hNPC |
| IGF2BP1 | protein_coding | chr17: 47074774 - 47133012 | + | hNPC_MPT_8920 | chr17: 47069774 - 47080108 | hNPC |
| METTL4 | protein_coding | chr18: 2537524 - 2571508 | - | hNPC_MPT_9408 | chr18: 2562198 - 2576564 | hNPC |
| RP11-715F3.1 | pseudogene | chr18: 2568391 - 2569121 | + | hNPC_MPT_9408 | chr18: 2562198 - 2576564 | hNPC |
| NDC80 | protein_coding | chr18: 2571510 - 2616634 | + | hNPC_MPT_9408 | chr18: 2562198 - 2576564 | hNPC |
| CDKN1B | protein_coding | chr12: 12867992 - 12875305 | + | hNPC_MPT_4398 | chr12: 12865058 - 12883865 | hNPC |
| RP11-180M15.4 | lncRNA | chr12: 12876231 - 12876945 | - | hNPC_MPT_4398 | chr12: 12865058 - 12883865 | hNPC |
| APOLD1 | protein_coding | chr12: 12878851 - 12982909 | + | hNPC_MPT_4398 | chr12: 12865058 - 12883865 | hNPC |
| WNT5A-AS1 | lncRNA | chr3: 55521727 - 55522336 | + | hNPC_MPT_14662 | chr3: 55510224 - 55528973 | hNPC |
| WNT5A | protein_coding | chr3: 55499743 - 55523973 | - | hNPC_MPT_14662 | chr3: 55510224 - 55528973 | hNPC |
| SIRT3 | protein_coding | chr11: 215458 - 236931 | - | hNPC_MPT_3047 | chr11: 228683 - 249429 | hNPC |
| PSMD13 | protein_coding | chr11: 236546 - 252983 | + | hNPC_MPT_3047 | chr11: 228683 - 249429 | hNPC |
| CSAD | protein_coding | chr12: 53551447 - 53575135 | - | hNPC_MPT_4670 | chr12: 53562554 - 53580135 | hNPC |
| ZNF740 | protein_coding | chr12: 53574484 - 53584596 | + | hNPC_MPT_4670 | chr12: 53562554 - 53580135 | hNPC |
| AEBP2 | protein_coding | chr12: 19556979 - 19873735 | + | hNPC_MPT_4431 | chr12: 19587608 - 19598515 | hNPC |
| NASP | protein_coding | chr1: 46049518 - 46084566 | + | hNPC_MPT_705 | chr1: 46073841 - 46085731 | hNPC |
| SMAD4 | protein_coding | chr18: 48494410 - 48611415 | + | hNPC_MPT_9683 | chr18: 48549764 - 48561583 | hNPC |
| PTPN6 | protein_coding | chr12: 7055631 - 7070479 | + | hNPC_MPT_4341 | chr12: 7047665 - 7065538 | hNPC |
| U47924.31 | lncRNA | chr12: 7052671 - 7053767 | - | hNPC_MPT_4341 | chr12: 7047665 - 7065538 | hNPC |
| C12orf57 | protein_coding | chr12: 7052141 - 7055166 | + | hNPC_MPT_4341 | chr12: 7047665 - 7065538 | hNPC |
| RNU7-1 | snRNA | chr12: 7052979 - 7053041 | + | hNPC_MPT_4341 | chr12: 7047665 - 7065538 | hNPC |
| ZNF66 | protein_coding | chr19: 20959110 - 20991922 | + | hNPC_MPT_10396 | chr19: 20954110 - 20964231 | hNPC |
| OPHN1 | protein_coding | chrX: 67262186 - 67653755 | - | hNPC_MPT_21674 | chrX: 67648369 - 67658647 | hNPC |
| RP11-575H3.1 | lncRNA | chr2: 91768393 - 91768920 | + | hNPC_MPT_11809 | chr2: 91761537 - 91782536 | hNPC |
| AC018696.4 | pseudogene | chr2: 91766537 - 91766632 | + | hNPC_MPT_11809 | chr2: 91761537 - 91782536 | hNPC |
| AC116050.1 | pseudogene | chr2: 91777536 - 91809447 | + | hNPC_MPT_11809 | chr2: 91761537 - 91782536 | hNPC |
| Chrom | Start | End | GeneHancer identifier | Cell line/Tissue |
| chr12 | 12372335 | 12372933 | GH12J012219 | hNPC |
| chr12 | 12373734 | 12374934 | GH12J012220 | hNPC |
| chr12 | 12376734 | 12377934 | GH12J012224 | hNPC |
| chr12 | 12380734 | 12382134 | GH12J012227 | hNPC |
| chr12 | 12382334 | 12383134 | GH12J012229 | hNPC |
| chr12 | 12383735 | 12384934 | GH12J012231 | hNPC |
| chr12 | 12389734 | 12390534 | GH12J012237 | hNPC |
| chr12 | 12391535 | 12392933 | GH12J012239 | hNPC |
| chr12 | 12393457 | 12395327 | GH12J012240 | hNPC |
| chr12 | 12400734 | 12400934 | GH12J012250 | hNPC |
| chr12 | 12407535 | 12409734 | GH12J012255 | hNPC |
| chr12 | 12367134 | 12370405 | GH12J012214 | hNPC |
| Chrom | Start | End | Cell line/Tissue |